Job Details

Overview

Job: Programmer Analyst

Location: 9500 Gilman Drive, La Jolla, CA, 92093

Initial Review Date: Thu 7/24/2025

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UC San Diego values equity, diversity, and inclusion. If you are interested in being part of our team, possess the needed licensure and certifications, and feel that you have most of the qualifications and/or transferable skills for a job opening, we strongly encourage you to apply.

Note: UCSD Layoff from Career Appointment: Apply by 07/14/2025 for consideration with preference for rehire. Special Selection Applicants: Apply by 07/24/2025. Eligible Special Selection clients should contact their Disability Counselor for assistance.

Responsibilities

Acting as an independent computer programming specialist dedicated to continued development and maintenance of bioinformatics software (e.g., Cytoscape, NDEx and Cytoscape Cyberinfrastructure) and novel biological visualizations. Evaluates state-of-the-art technologies for suitability in executing such projects, and incorporates them into development strategies and designs, as appropriate. Coordinates, evaluates, and leads ongoing software development activities executed by lab-based, national, and international team members. Analyzes current and future software needs of the lab, and integrates recommended software and hardware solutions into the existing environment. Sets up, configures, and maintains web servers in addition to evaluating and deploying new web technologies. Provides comprehensive consulting services for students and postdoctoral researchers regarding software and hardware matters.

Uses skills as an advanced, specialized bioinformatics programming professional with an in-depth understanding of computational algorithms and systems to identify and resolve a wide range of highly complex issues / software bugs where analysis of situations or data requires an in-depth evaluation of variable factors. May lead or mentor a team of bioinformatics programming professionals.

Minimum Qualifications

• Nine years of related experience, education/training, OR a Bachelor's degree in related area plus five years of related experience/training.
• In-depth knowledge of bioinformatics methods, applications programming, web development and data structures.
• In-depth knowledge of bioinformatics programming design, modification and implementation.
• Advanced understanding of relational databases, web interfaces and operating systems.
• Working knowledge of project management.
• In-depth knowledge of modern biology and applicable field of research.
• Advanced interpersonal skills to work with technical and non-technical personnel at all levels, including senior project leadership.
• Ability to communicate technical information in a clear and concise manner.
• Advanced ability to interface with management on a regular basis.
• Ability to meet deadlines and demonstrate advanced problem solving skills.
• In-depth knowledge of web, application and data security concepts and methods.
• Extensive professional experience and expert-level proficiency in Java, TypeScript, JavaScript and Python, including object-oriented programming and relational database design.
• Experience with UNIX operating systems (Ubuntu and CentOS) and UNIX system administration.
• Knowledge of microcomputer based platforms (Windows or Mac OS) and shell script programming.
• Experience with general software utilities such as IDEs, compilers and debuggers.
• Knowledge of computer communications mechanisms (TCP/IP) and network security.
• Demonstrated ability to think and work independently in an organized and effective manner in an environment with rapidly shifting priorities.

Special Conditions

• Employment is subject to a criminal background check.
• Must be able to work outside normal hours to meet project deadlines, as well as system maintenance and emergencies.
• Must be willing to answer work-related questions while not physically at the work location.
• Must be willing to work in an animal-related research environment.

Pay Transparency

Annual Full Pay Range: $119,400 - $230,800 (will be prorated if the appointment percentage is less than 100%)

Hourly Equivalent: $57.18 - $110.54

Factors in determining the appropriate compensation for a role include experience, skills, knowledge, abilities, education, licensure and certifications, and other business and organizational needs. The Hiring Pay Scale referenced in the job posting is the budgeted salary or hourly range that the University reasonably expects to pay for this position. The Annual Full Pay Range may be broader than what the University anticipates to pay for this position, based on internal equity, budget, and collective bargaining agreements (when applicable).

Additional Information

If employed by the University of California, you will be required to comply with our Policy on Vaccination Programs, which may be amended or revised from time to time. Federal, state, or local public health directives may impose additional requirements.

If applicable, life-support certifications (BLS, NRP, ACLS, etc.) must include hands-on practice and in-person skills assessment; online-only certification is not acceptable.

UC San Diego Health Sciences is comprised of our School of Medicine, Skaggs School of Pharmacy and Pharmaceutical Sciences, The Herbert Wertheim School of Public Health and Human Longevity Science, and our Student Health and Well-Being Department. We invite you to join our team!

Applications/Resumes are accepted for current job openings only. For full consideration on any job, applications must be received prior to the initial closing date. If a job has an extended deadline, applications/resumes will be considered during the extension period; however, a job may be filled before the extended date is reached.

To foster the best possible working and learning environment, UC San Diego strives to cultivate a rich and diverse environment, inclusive and supportive of all students, faculty, staff and visitors. For more information, please visit UC San Diego Principles of Community.

The University of California is an Equal Opportunity Employer. All qualified applicants will receive consideration for employment without regard to race, color, religion, sex, sexual orientation, gender identity, national origin, disability, age, protected veteran status, or other protected status under state or federal law.

UC San Diego is a smoke and tobacco free environment. Please visit smokefree.ucsd.edu for more information.

UC San Diego Health maintains a marijuana and drug free environment. Employees may be subject to drug screening.